Table of contents | Introduction | Citing metaDigitise | Installation | Setting up directory structures | Example of how it works | Processing batches of figures of different types | Re-importing previously digitised data and accessing raw data | Editing and plotting digitised figures | Conclusions
Package: metaDigitise 1.0.2
metaDigitise: Extract and Summarise Data from Published Figures
High-throughput, flexible and reproducible extraction of data from figures in primary research papers. metaDigitise() can extract data and / or automatically calculate summary statistics for users from box plots, bar plots (e.g., mean and errors), scatter plots and histograms.
Authors:
metaDigitise_1.0.2.tar.gz
metaDigitise_1.0.2.zip(r-4.7)metaDigitise_1.0.2.zip(r-4.6)metaDigitise_1.0.2.zip(r-4.5)
metaDigitise_1.0.2.tgz(r-4.6-any)metaDigitise_1.0.2.tgz(r-4.5-any)
metaDigitise_1.0.2.tar.gz(r-4.7-any)metaDigitise_1.0.2.tar.gz(r-4.6-any)
metaDigitise_1.0.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
metaDigitise/json (API)
| # Install 'metaDigitise' in R: |
| install.packages('metaDigitise', repos = c('https://daniel1noble.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/daniel1noble/metadigitise/issues
Last updated from:92dacc235a. Checks:7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | NOTE | 125 | ||
| source / vignettes | OK | 179 | ||
| linux-release-x86_64 | NOTE | 128 | ||
| macos-release-arm64 | NOTE | 142 | ||
| macos-oldrel-arm64 | NOTE | 162 | ||
| windows-devel | NOTE | 83 | ||
| windows-release | NOTE | 95 | ||
| windows-oldrel | NOTE | 76 | ||
| wasm-release | OK | 112 |
Exports:CI95_to_sddir_detailserror_to_sdget_notDone_file_detailsgetExtractedgrandMeangrandSDinternal_digitisemetaDigitiseprocess_new_filesrange_to_sdrqm_to_meanrqm_to_sdse_to_sdsetup_calibration_dir
Dependencies:clicurlgluelifecyclemagickmagrittrpurrrRcpprlangvctrs
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| ask_variable | ask_variable |
| bulk_edit | bulk_edit |
| cal_coords | cal_coords |
| calibrate | calibrate |
| cat_matrix | cat_matrix |
| CI95_to_sd | CI95_to_sd |
| convert_group_data | convert_group_data |
| convert_histogram_data | convert_histogram_data |
| delete_points | delete_group |
| dir_details | dir_details |
| edit_group | edit_group |
| edit_metaDigitise | edit_metaDigitise |
| enter_N | enter_N |
| error_to_sd | error_to_sd |
| extract_digitised | extract_digitised |
| filename | filename |
| get_notDone_file_details | get_notDone_file_details |
| getExtracted | getExtracted |
| getVals | getVals |
| grandMean | grandMean |
| grandSD | grandSD |
| group_scatter_extract | group_scatter_extract |
| histogram_extract | histogram_extract |
| import_menu | import_menu |
| import_metaDigitise | import_metaDigitise |
| internal_digitise | internal_digitise |
| internal_redraw | internal_redraw |
| is.even | is.even |
| is.wholenumber | is.wholenumber |
| isNumeric | isNumeric |
| knownN | knownN |
| load_metaDigitise | load_metaDigitise |
| locator_mD | locator_mD |
| getVals | logAxes |
| MB_extract | MB_extract |
| metaDigitise | metaDigitise |
| order_lists | order_lists |
| plot.metaDigitise | plot.metaDigitise |
| point_extraction | point_extraction |
| print_cal_instructions | print_cal_instructions |
| print.metaDigitise | print.metaDigitise |
| process_data | process_data |
| process_new_files | process_new_files |
| range_to_sd | range_to_sd |
| redraw_calibration | redraw_calibration |
| redraw_points | redraw_points |
| rotate_graph | redraw_rotation |
| rqm_to_mean | rqm_to_mean |
| rqm_to_sd | rqm_to_sd |
| se_to_sd | se_to_sd |
| setup_calibration_dir | setup_calibration_dir |
| single_MB_extract | single_MB_extract |
| specify_type | specify_type |
| summary.metaDigitise | summary.metaDigitise |
| user_base | user_base |
| user_calibrate | user_calibrate |
| user_count | user_count |
| user_numeric | user_numeric |
| user_options | user_options |
| user_rotate_graph | user_rotate_graph |
| user_unique | user_unique |
