Package: orchaRd 2.2.1

orchaRd: Visualizing Meta-Analyses with Orchard Plots and Prediction Intervals

Generates prediction intervals and orchard plots for meta-analytic and meta-regression models fitted with the 'metafor' package. Orchard plots augment classic forest plots by displaying individual effect sizes together with group means and their confidence and prediction intervals, providing an enhanced visualization of meta-analytic data for ecology, evolution, and beyond. Methods are described in Nakagawa et al. (2023) <doi:10.1111/2041-210X.14152>.

Authors:Daniel Noble [aut, cre], Shinichi Nakagawa [aut]

orchaRd_2.2.1.tar.gz
orchaRd_2.2.1.zip(r-4.7-any)orchaRd_2.2.1.zip(r-4.6-any)orchaRd_2.2.1.zip(r-4.5-any)
orchaRd_2.2.1.tgz(r-4.6-any)orchaRd_2.2.1.tgz(r-4.5-any)
orchaRd_2.2.1.tar.gz(r-4.7-any)orchaRd_2.2.1.tar.gz(r-4.6-any)
orchaRd_2.2.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
orchaRd/json (API)

# Install 'orchaRd' in R:
install.packages('orchaRd', repos = c('https://daniel1noble.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/daniel1noble/orchard/issues

Datasets:

On CRAN:

Conda:

7.09 score 22 stars 133 scripts 505 downloads 35 exports 51 dependencies

Last updated from:f726cd9d9f. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK225
source / vignettesOK197
linux-releaseOK219
macos-releaseOK290
macos-oldrelOK312
windows-develOK262
windows-releaseOK212
windows-oldrelOK296
wasm-releaseOK123

Exports:.safe_lnM_dep.safe_lnM_indep%>%bubble_plotcaterpillarscor_diffcvh1_mlcvh2_mlfirstupget_data_rawget_data_raw_contglmmTMB_to_rmai2_mlleave_one_outm1_mlm2_mlmagnitude_effectsmatrix_i2ml_cvh1ml_cvh2ml_m1ml_m2mod_resultsmoment_effectsnum_studiesorchard_leave1outorchard_plotpred_interval_esmeanspub_bias_plotR2_calcr2_mlratio_i2submergeweighted_varZr_to_r

Dependencies:apebeeswarmclicpp11crayondigestdplyremmeansestimabilityfarvergenericsggbeeswarmggplot2gluegtablehmsisobandlabelinglatex2explatticelazyevallifecyclemagrittrMASSmathjaxrMatrixmetadatmetaformvtnormnlmenumDerivpbapplypillarpkgconfigprettyunitsprogressR6RColorBrewerRcpprlangrWishartS7scalestestertibbletidyselectutf8vctrsviporviridisLitewithr