Package: orchaRd 2.2.1

orchaRd: Visualizing Meta-Analyses with Orchard Plots and Prediction Intervals

Generates prediction intervals and orchard plots for meta-analytic and meta-regression models fitted with the 'metafor' package. Orchard plots augment classic forest plots by displaying individual effect sizes together with group means and their confidence and prediction intervals, providing an enhanced visualization of meta-analytic data for ecology, evolution, and beyond. Methods are described in Nakagawa et al. (2023) <doi:10.1111/2041-210X.14152>.

Authors:Daniel Noble [aut, cre], Shinichi Nakagawa [aut]

orchaRd_2.2.1.tar.gz
orchaRd_2.2.1.zip(r-4.7-any)orchaRd_2.2.1.zip(r-4.6-any)orchaRd_2.2.1.zip(r-4.5-any)
orchaRd_2.2.1.tgz(r-4.6-any)orchaRd_2.2.1.tgz(r-4.5-any)
orchaRd_2.2.1.tar.gz(r-4.7-any)orchaRd_2.2.1.tar.gz(r-4.6-any)
orchaRd_2.2.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
orchaRd/json (API)

# Install 'orchaRd' in R:
install.packages('orchaRd', repos = c('https://daniel1noble.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/daniel1noble/orchard/issues

Datasets:

On CRAN:

Conda:

5.98 score 20 stars 15 downloads 35 exports 51 dependencies

Last updated from:e2dccdb385. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK269
source / vignettesOK282
linux-release-x86_64OK244
macos-release-arm64OK285
macos-oldrel-arm64OK254
windows-devel-x86_64OK263
windows-release-x86_64OK286
windows-oldrel-x86_64OK290
wasm-releaseOK139

Exports:.safe_lnM_dep.safe_lnM_indep%>%bubble_plotcaterpillarscor_diffcvh1_mlcvh2_mlfirstupget_data_rawget_data_raw_contglmmTMB_to_rmai2_mlleave_one_outm1_mlm2_mlmagnitude_effectsmatrix_i2ml_cvh1ml_cvh2ml_m1ml_m2mod_resultsmoment_effectsnum_studiesorchard_leave1outorchard_plotpred_interval_esmeanspub_bias_plotR2_calcr2_mlratio_i2submergeweighted_varZr_to_r

Dependencies:apebeeswarmclicpp11crayondigestdplyremmeansestimabilityfarvergenericsggbeeswarmggplot2gluegtablehmsisobandlabelinglatex2explatticelazyevallifecyclemagrittrMASSmathjaxrMatrixmetadatmetaformvtnormnlmenumDerivpbapplypillarpkgconfigprettyunitsprogressR6RColorBrewerRcpprlangrWishartS7scalestestertibbletidyselectutf8vctrsviporviridisLitewithr